Fiehn laboratory presentations at MANA 2024, Tampa, October 2024
Oral presentation "Standardizing nontargeted metabolomics and exposomics: The LC-BinBase environment"
Oliver Fiehn et al. Thursday October 24, keynote lecture
Oral presentation "Metabolomics of 13,700 human plasma samples for the TEDDY cohort: A Big Data Challenge and Opportunity for Mass Spectrometry"
Uri Keshet et al.
Oral presentation "Food for Thought: Characterizing 500 Commonly Consumed Foods through Standardized Metabolomics for The Periodic Table of Food Initiative"
Arpana Vaniya et al.
Poster presentation "Simultaneous quantitation and discovery (SQUAD) metabolomics workflow for the analysis of flavonoids and their conjugates in blood, urine and food samples"
Yendry Carvajal et al. , Thursday October 24, poster session
Fiehn laboratory presentations at ASMS 2024, Anaheim, June 2024
Oral presentation "Standardizing nontargeted metabolomics and exposomics: The LC-BinBase environment"
Oliver Fiehn et al. Tuesday June 4 Session : Informatics: Metabolomics and Lipidomics
Oral presentation "Advancing Absolute Lipid Quantification in Nontargeted LC-HRMS/MS Analysis by Multi-Point Calibration"
Lauren Bishop et al. Monday June 3 Session: Lipidomics: Targeted and Untargeted
Oral presentation "Metabolomics of 13,700 human plasma samples for the TEDDY cohort: A Big Data Challenge and Opportunity for Mass Spectrometry"
Uri Keshet et al. Monday June 3 Session f: Metabolomics: Untargeted Profiling
Oral presentation "Food for Thought: Characterizing 500 Commonly Consumed Foods through Standardized Metabolomics for The Periodic Table of Food Initiative"
Arpana Vaniya et al. Tuesday June 4 Session: Food Safety & Chemistry: Innovations
Poster presentation "Selecting Optimal Internal Standards for Non-targeted LC-MS Metabolomics in a Large Core Facility" Abstract ID number: 319084
Emi Cann et al. Tuesday June 4 Topic area: Metabolomics: Untargeted Metabolite Profiling II
Poster presentation "Advancing Metabolomics Analysis using GC-MS with Cold EI for Increased Identification, Throughput, and Sensitivity" Abstract ID number: 319018
Luis Valdiviez et al. Tuesday June 4 Topic area : Metabolomics: Untargeted Metabolite Profiling II
Poster presentation "Molecular spatial distribution in transgenic rat model of Alzheimer's disease using MALDI MS imaging" Abstract ID number: 318904
Tong Shen et al. Wednesday June 5 Topic area : Neuroscience and Neurodegenerative Disease Research II
Yuanyue Li et al. Monday June 3 Topic area: Informatics: Metabolomics and Lipidomics
Huaxu Yu et al. Monday June 3 Topic area: Small Molecules: Qualitative and Quantitative Analysis
Min Liu et al. Tuesday June 4 Topic area for your poster: Biomarkers: Quantitative Analysis I
Fiehn laboratory presentations at Metabolomics Association of North America, Edmonton/Alberta, Canada. September 2022
"Database query across 160,000 metabolomic samples in GC-TOF mass spectrometry"
Parker Bremer et al.
"Impacts of Tissue-Specific Adduct Formation on Lipid Quantification"
Lauren Bishop et al.
"Characterizing peroxisomal, metabolome and lipidome changes following COVID infection in the Syrian Hamster model"
Kamyar Choubak et al.
Fiehn laboratory presentations at Metabolomics Society, Valencia/Spain, June 2022
"Revisiting CASMI: showcase your success in compound identification for 500 new unknowns, using raw LC-MS/MS data."
Dr. Arpana Vaniya, Dr. Oliver Fiehn
#258 oral presentation, session keynote "microbiome and GI function"
"Spatial-, temporal- and inter-person variation of metabolites across the upper and lower human gastrointestinal tract."
Dr. Oliver Fiehn et al.
#257 oral presentation
"Unraveling 100 plant glycosyltransferases with 600 Natural compounds: results of a combinatorial screen"
Elys Rodriguez et al.
#350 oral presentation
"Ultra-high throughput metabolomics and lipidomics: Results from the first 5,000 samples"
Zachary Rabow et al.
#115 oral presentation
"Stool metabolome of four NIST stool reference materials"
Dr. Racquel Cumeras Olmeda et al.
Fiehn laboratory presentations at ASMS 2022, June 2022
| date | ASMS # session |
title | First author et al. | ||
| 06/08/2022 | 310290 metabolomics: untargeted |
oral: LC-BinBase: Metabolomic and lipidomic results from the first 5,000 samples
|
Uri Keshet | ||
| 06/07/2022 |
311534 new technologies |
oral: Comparison of CFM-ID, MS-FINDER, and SIRIUS+CSI:FingerID with LC-high resolution-MS/MS data from 500 new reference compounds |
Arpana Vaniya | ||
| 06/06/2022 |
311786 Drug metabolism, Pharmacokinetics |
oral: Multi-organ analysis of metabolomics data: which significant changes in plasma metabolites are also found in muscle, adipose, and liver? |
Sara Greenfield | ||
| 06/06/2022 |
311513 Informatics |
poster: Libgen: a fully automated software for constructing, curating, and optimizing MS libraries | Fanzhou Kong | ||
| 06/08/2022 |
311557 Metabolomics: General |
poster: Molecular spatial distribution in mouse tissues with LC-MS/MS profiling and MALDI Imaging on MALDI Trapped Ion-Mobility TOF |
Tong Shen | ||
| 06/08/2022 | 308916 AI in MS |
poster: Transfer learning enhanced elucidation of Glycosyltransferases-substrate specificity | Shunyang Wang | ||
| 06/08/2022 | 310308 Informatics |
poster: Spectral entropy outperforms MS/MS dot product similarity for small-molecule compound identification | Yuanyue Li | ||
Fiehn laboratory presentations at ASMS 2021
| date | ASMS # session |
title | First author et al. |
| 11/02/2021 | 306800 HTP MS |
oral: Removing the limits for large-scale studies using high-speed and high-throughput untargeted metabolomics
|
Oliver Fiehn |
| 11/01/2021 | 306487 metabolomics: untargeted |
oral: Combining electron activation and collision-induced dissociation yields massively enriched mass spectra for >3,000 metabolites | Uri Keshet |
| 11/03/2021 | 306927 microbiome |
oral: In-vivo sampling of healthy human intestinal tract regions using a novel ingestible sampling device with comprehensive metabolomics | Jacob Folz |
| 11/02/2021 | 308364 lipidomics |
oral: The NIH Metabolomics Consortium Unknown Lipids Project: An Inter-laboratory Study of the ‘Dark Matter’ of Untargeted Lipidomics Data | Charles Evans (U Michigan) |
| 11/01/2021 | 308127 poster |
Extending the MassBank.us natural product reference mass spectral library with more than 4,400 new reference standards | Arpana Vaniya |
| 11/02/2021 | 307730 poster |
Differential oxidized complex lipids in bio-specimen by LC-DDA-MS/MS and iterative MS/MS | Tong Shen |
| 11/02/2021 | 308166 poster |
Novel Insights of ME/CFS Patients by High Resolution Mass Spectrometry Indicates Dyslipidemia and Peroxisome Dysfunction | Zachary Rabow |
| 11/01/2021 | 307027 poster |
Alternative identification of Glycosides using MS/MS matching with Aglycone Mass Spectra Library | Elys Rodriguez |
| 11/01/2021 | 306613 poster |
Predicting electron ionization mass spectra by excited-state molecular dynamics | Shunyang Wang |
| 11/02/2021 | 306679 poster |
Accurate Mass Spectral and Retention Index Library for Metabolomics Based on Quadrupole Time-of-flight Gas Chromatography/Mass Spectrometry | Honglian (Bella) Ye |
Fiehn laboratory presentations at ASMS 2020
| date | ASMS # | title | First author et al. |
| Monday June 01, 2020 | 304878 |
oral: Combining biological and chemical information in compound annotation for untargeted metabolomics
|
Oliver Fiehn |
| 2020 | poster | Identifying plant natural products in the food we eat by untargeted metabolomics | Arpana Vaniya |
| 2020 | poster | Comparing accurate mass MS/MS spectral similarity algorithms for small molecules | Yuanyue Li |
| 2020 | poster | Strong sexual dimorphism of plasma metabolites in 30 gene knockout mice strains by multi-platform mass spectrometry analyses | Ying Zhang |
| 2020 | poster |
Untargeted identification of acyl-CoAs in mouse liver using the in-silico CoA-BLAST library | Uri Keshet |
| 2020 | poster | MicroLC-MS/MS Untargeted Metabolomics Analysis of Common Food Products | Tong Shen |
| Thursday June 04, 2020 | 304721 |
oral: Using Complete Hydrogen-Deuterium Exchange to Identify Unknown Compounds in Untargeted HILIC Metabolomics of Mouse Mammary Tumors | Clayton Bloszies |
Fiehn laboratory presentations at ASMS 2019
| date | ASMS # | title | First author et al. |
| Wednesday June 05, 2019 |
Leco breakfast 7:00 a.m. |
Oral: Using the Pegasus BT GC-time of flight mass spectrometer with open access online metabolomic databases |
Oliver Fiehn |
| Monday June 03, 2019 |
MP511 | Poster: Untargeted Lipidomic Profiling of Bis(monoacylglycero)phosphate Lipids in Cancer Cells and Tumor Tissues Point to Transformation Specific Regulation of Acyl Chains |
Megan Showalter |
| Monday June 03, 2019 |
MP527 | Poster: Rapid and sensitive characterization of FAHFA lipids using an untargeted lipidomics approach | Tong Shen |
| Wednesday June 05, 2019 |
WP415 | Poster: Using Cloud Computing for Large Scale Data Processing in Clinical Metabolomics |
Oliver Fiehn |
| Wednesday June 05, 2019 |
WP596 |
Poster: A Novel and Comprehensive Steroid Assay Including Thyroxin Compounds Using Small Volume Human Serum or Plasma Samples |
Gregory Byram |
| Thursday June 06, 2019 |
ThP440 |
Poster: Development of a new vitamin D assay and its application to profile vitamin D metabolites in a pediatric population |
Brian DeFelice |
Fiehn laboratory presentations at ASMS 2018
| date | ASMS # | title | First author et al. |
| Sunday June 03, 2018 |
Sciex user meeting | Oral: Using cheminformatics tools with accurate mass untargeted + targeted LC-MS/MS for comprehensive metabolomics in human plasma | Oliver Fiehn |
| Monday June 04, 2018 |
MOD 8:30 am Ballroom 20D |
Oral: Structural annotation and identification of metabolites by mass spectrometry-based cheminformatics | Oliver Fiehn |
| Wednesday June 06, 201 |
WOG 3:50 pm Ballroom 6CF |
Oral: MassBank of North America: An Open-Access, Auto-Curating Mass Spectral Repository for Compound Identification | Sajjan S. Mehta |
| Monday June 04, 2018 |
MP564 | Poster: An Extensive Comparison of MS Libraries of Plant Natural Products Across LTQ, Q Exactive HF, and QTOF MS | Arpana Vaniya |
| Monday June 04, 2018 |
MP 592 |
Poster: Merging Bile Acids and Steroids Targeted Analysis using Parallel Reaction Monitoring on a Q Exactive HF MS |
Tong Shen |
| Monday June 04, 2018 |
MP 609 |
Poster: Chemical and Correlation Similarity Enrichment Analysis for Interpreting Untargeted Lipidomics Datasets from the Alzheimer’s Disease Neuroimaging Initiative Cohort |
Dinesh Barupal |
| Tuesday June 05, 2018 |
TP471 |
Poster: Integrated Analysis of Proteomics and Metabolomics Data in ER- and ER+ Breast Cancer Tissues |
Bei Gao |
| Wednesday June 06, 2018 |
WP 442 |
Poster: Increasing Annotation Rates in Untargeted Lipidomics Research Using Ion Mobility-Mass Spectrometry |
Ivana Blazenovic |
| Wednesday June 06, 2018 |
WP 545 |
Poster: iTree: MSn Mass Spectral Tree Library of Plant Natural Products |
Bennett Haffner |
| Wednesday June 06, 2018 |
WP 560 | Poster: Improving Precision in Plasma Amino Acid Analysis for Large Clinical Cohort Studies Using Stable Isotope Internal Standards | Ying Zhang |
| Wednesday June 06, 2018 |
Room 17 AB 5:45 - 7:00 pm |
Workshop: Best practices for metabolomics - Exchange of mass spectra in MassBank of North America | Oliver Fiehn |
| Thursday June 07, 2018 |
ThP 087 |
Poster: New Method for Rapid LC-MS/MS Quantification of N1,N12-Diacetylspermine in a Wide-Range of Common Biofluids, Relevance in Cancer Biomarker Screening |
Brian DeFelice |
Fiehn laboratory presentations at ASMS 2017
| date | ASMS # | title | First author et al. |
| Monday June 05, 2017 oral |
289099 | Increasing compound identification rates in untargeted metabolomics research | Ivana Blazenovic |
| Wednesday June 07, 2017 poster |
290039 | Discovering isomeric metabolites with liquid chromatography drift tube-ion mobility mass spectrometry | Tong Shen |
| Wednesday June 07, 2017 poster |
290727 | Identifying biologically important metabolites by mass spectrometry-based cheminformatics | Zijuan Lai |
| Wednesday June 07, 2017 poster |
288470
|
Comparison of GC-TOF-MS, GC-QTOF-MS and GC-quadrupole-MS for stable isotope tracer studies | Bei Gao |
| Monday June 05, 2017 poster |
289985 | Investigation of natural products in symbiotic nitrogen-fixing root nodules of Datisca glomerata by LC-MSn and ion tree analysis using iTree | Arpana Vaniya |
| Monday June 05, 2017 poster |
290123 | A targeted LC-MS/MS method for separation and quantification of numerous Vitamin D metabolites including 1α,25(OH)2D, 3-EPI-25OHD3, and 25OHD3 | Brian DeFelice |
| Monday June 05, 2017 poster |
290077 | Pharmacokinetic and metabolomic profiling of inhaled simvastatin in rhesus macaque | Mona ElBadawi-Sidhu |
| Thursday June 08, 2017 poster |
288442
|
Comparison of eight high resolution LC-MS platforms validates accurate quantifications in untargeted plasma lipidomics | Tomas Cajka |
| Tuesday June 06, 2017 poster |
289190
|
Untargeted metabolomic profiling of the epitranscriptome: discovery of new modified nucleobases in RNA | Megan Showalter |
| Thursday June 08, 2017 poster |
290126
|
MassBank of North America: an open access metadata-centric, auto-curating repository for mass spectra from different instrument platforms | Gert Wohlgemuth |
Selected interesting publications