Oliver Fiehn

UC Davis

Metabolomics

Full list
 
Fiehn laboratory presentations at ASMS 2017
 
date ASMS # title First author et al.
Monday June 05, 2017
oral
289099 Increasing compound identification rates in untargeted metabolomics research Ivana Blazenovic
Wednesday June 07, 2017
poster
290039 Discovering isomeric metabolites with liquid chromatography drift tube-ion mobility mass spectrometry Tong Shen
Wednesday June 07, 2017
poster
290727 Identifying biologically important metabolites by mass spectrometry-based cheminformatics Zijuan Lai
Wednesday June 07, 2017
poster

288470

Comparison of GC-TOF-MS, GC-QTOF-MS and GC-quadrupole-MS for stable isotope tracer studies Bei Gao
Monday June 05, 2017
poster
289985 Investigation of natural products in symbiotic nitrogen-fixing root nodules of Datisca glomerata by LC-MSn and ion tree analysis using iTree Arpana Vaniya
Monday June 05, 2017
poster
290123 A targeted LC-MS/MS method for separation and quantification of numerous Vitamin D metabolites including 1α,25(OH)2D, 3-EPI-25OHD3, and 25OHD3 Brian DeFelice
Monday June 05, 2017
poster
290077 Pharmacokinetic and metabolomic profiling of inhaled simvastatin in rhesus macaque Mona ElBadawi-Sidhu
Thursday June 08, 2017
poster

288442

Comparison of eight high resolution LC-MS platforms validates accurate quantifications in untargeted plasma lipidomics Tomas Cajka
Tuesday June 06, 2017
poster

289190

Untargeted metabolomic profiling of the epitranscriptome: discovery of new modified nucleobases in RNA Megan Showalter
Thursday June 08, 2017
poster

290126

MassBank of North America: an open access metadata-centric, auto-curating repository for mass spectra from different instrument platforms Gert Wohlgemuth
 

Title

Year
Metabolite Measurement: Pitfalls to Avoid and Practices to Follow
W Lu, X Su, MS Klein, IA Lewis, O Fiehn, JD Rabinowitz
Annual Review of Biochemistry 86 (1)
2017
Metabolic perturbations of postnatal growth restriction and hyperoxia-induced pulmonary hypertension in a bronchopulmonary dysplasia model
MR La Frano, JF Fahrmann, D Grapov, O Fiehn, TL Pedersen, ...
Metabolomics 13 (4), 32
2017
Metabox: A Toolbox for Metabolomic Data Analysis, Interpretation and Integrative Exploration
K Wanichthanarak, S Fan, D Grapov, DK Barupal, O Fiehn
PloS one 12 (1), e0171046
2017
Integrated Metabolomics and Proteomics Highlight Altered Nicotinamide-and Polyamine Pathways in Lung Adenocarcinoma   JF Fahrmann, DD Grapov, K Wanichthanarak, BC DeFelice, MR Salemi, ...
 Carcinogenesis, bgw205
2017
Pharmacometabolomic signature links simvastatin therapy and insulin resistance
M Elbadawi-Sidhu, RA Baillie, H Zhu, YDI Chen, MO Goodarzi, JI Rotter, ...
Metabolomics 13 (1), 11
2017
Evaluation of metabolomics profiles of grain from maize hybrids derived from near-isogenic GM positive and negative segregant inbreds demonstrates that observed differences cannot be attributed unequivocally to the GM trait
GG Harrigan, TV Venkatesh, M Leibman, J Blankenship, T Perez, S Halls, ...
Metabolomics 12 (5), 1-14
2016
Changes in plasma metabolites and glucose homeostasis during omega-3 polyunsaturated fatty acid supplementation in women with polycystic ovary syndrome
SE Karakas, B Perroud, T Kind, M Palazoglu, O Fiehn
BBA Clinical
2016
Metabolomics by Gas Chromatography–Mass Spectrometry: Combined Targeted and Untargeted Profiling
O Fiehn
Current Protocols in Molecular Biology, 30.4. 1-30.4. 32
2016
Evidence that COG0325 proteins are involved in PLP homeostasis
L Prunetti, B El Yacoubi, CR Schiavon, E Kirkpatrick, L Huang, M Bailly, ...
Microbiology 162 (4), 694-706
2016
Serum phosphatidylethanolamine levels distinguish benign from malignant solitary pulmonary nodules and represent a potential diagnostic biomarker for lung cancer
JF Fahrmann, DD Grapov, BC DeFelice, S Taylor, K Kim, K Kelly, ...
Cancer Biomarkers, 1-9
2016
Citrus tristeza virus infection in sweet orange trees and a mandarin× tangor cross alters low molecular weight metabolites assessed using gas chromatography mass spectrometry (GC/MS)
A Pasamontes, WHK Cheung, J Simmons, AA Aksenov, DJ Peirano, ...
Metabolomics 12 (3), 1-10
2016
Registered report: The common feature of leukemia-associated IDH1 and IDH2 mutations is a neomorphic enzyme activity converting alpha-ketoglutarate to 2-hydroxyglutarate
O Fiehn, MR Showalter, CE Schaner-Tooley
eLife 5, e12626
2016
Metabolomic assessment of key maize resources: GC-MS and NMR profiling of grain from B73 hybrids of the nested association mapping (NAM) founders and of geographically diverse landraces
TV Venkatesh, AW Chassy, O Fiehn, S Flint-Garcia, Q Zeng, K Skogerson, ...
Journal of agricultural and food chemistry
2016
PHARMACOMETABOLOMIC SIGNATURES OF SUBJECTS WITH REFRACTORY MAJOR DEPRESSIVE DISORDER TREATED WITH ESKETAMINE OR KETAMINE
DM Rotroff, DG Corum, AA Motsinger-Reif, O Fiehn, N Bottrel, WC Drevets, ...
CLINICAL PHARMACOLOGY & THERAPEUTICS 99, S27-S28
2016
Increasing lipidomic coverage by selecting optimal mobile-phase modifiers in LC–MS of blood plasma
T Cajka, O Fiehn
Metabolomics 12 (2), 1-11
2016
Analysis of the genetic variation in growth, ecophysiology, and chemical and metabolomic composition of wood of Populus trichocarpa provenances
FP Guerra, JH Richards, O Fiehn, R Famula, BJ Stanton, R Shuren, ...
Tree Genetics & Genomes 12 (1), 1-16
2016
Eighteen new oleaginous yeast species
LA Garay, IR Sitepu, T Cajka, I Chandra, S Shi, T Lin, JB German, O Fiehn, ...
Journal of Industrial Microbiology & Biotechnology, 1-14
2016
Toward Merging Untargeted and Targeted Methods in Mass Spectrometry-Based Metabolomics and Lipidomics
T Cajka, O Fiehn
Analytical chemistry 88 (1), 524-545
2015
Ultrafast polyphenol metabolomics of red wines using microLC-MS/MS
Y Ma, N Tanaka, A Vaniya, T Kind, O Fiehn
Journal of agricultural and food chemistry
2015
The metabolome regulates the epigenetic landscape during naive-to-primed human embryonic stem cell transition
H Sperber, J Mathieu, Y Wang, A Ferreccio, J Hesson, Z Xu, KA Fischer, ...
Nature cell biology 17 (12), 1523-1535
2015
An in silico MS/MS library for automatic annotation of novel FAHFA lipids
Y Ma, T Kind, A Vaniya, I Gennity, JF Fahrmann, O Fiehn
Journal of cheminformatics 7 (1), 1-5
2015
Volatile organic compound (VOC) profiling of citrus tristeza virus infection in sweet orange citrus varietals using thermal desorption gas chromatography time of flight mass spectrometry (TD-GC/TOF-MS)
WHK Cheung, A Pasamontes, DJ Peirano, W Zhao, EE Grafton-Cardwell, ...
Metabolomics 11 (6), 1514-1525
2015
MINEs: open access databases of computationally predicted enzyme promiscuity products for untargeted metabolomics
JG Jeffryes, RL Colastani, M Elbadawi-Sidhu, T Kind, TD Niehaus, ...
Journal of cheminformatics 7 (1), 1-8
2015
Informatics for improved algal taxonomic classification and research: A case study of UTEX 2341
BT Higgins, D Nobles, Y Ma, W Wikoff, T Kind, O Fiehn, J Brand, ...
Algal Research 12, 545-549
2015
THE EXPOSOME: IDENTIFYING DRUGS AND FOOD COMPONENTS IN HUMAN COHORT SAMPLES USING UNTARGETED METABOLOMICS
O Fiehn, WR Wikoff, T Cajka
DRUG METABOLISM REVIEWS 47, 14-14
2015