Oliver Fiehn

UC Davis

Metabolomics

Full list
 
 

Title

Year
Metabolite Measurement: Pitfalls to Avoid and Practices to Follow
W Lu, X Su, MS Klein, IA Lewis, O Fiehn, JD Rabinowitz
Annual Review of Biochemistry 86 (1)
2017
Metabolic perturbations of postnatal growth restriction and hyperoxia-induced pulmonary hypertension in a bronchopulmonary dysplasia model
MR La Frano, JF Fahrmann, D Grapov, O Fiehn, TL Pedersen, ...
Metabolomics 13 (4), 32
2017
Metabox: A Toolbox for Metabolomic Data Analysis, Interpretation and Integrative Exploration
K Wanichthanarak, S Fan, D Grapov, DK Barupal, O Fiehn
PloS one 12 (1), e0171046
2017
Integrated Metabolomics and Proteomics Highlight Altered Nicotinamide-and Polyamine Pathways in Lung Adenocarcinoma   JF Fahrmann, DD Grapov, K Wanichthanarak, BC DeFelice, MR Salemi, ...
 Carcinogenesis, bgw205
2017
Pharmacometabolomic signature links simvastatin therapy and insulin resistance
M Elbadawi-Sidhu, RA Baillie, H Zhu, YDI Chen, MO Goodarzi, JI Rotter, ...
Metabolomics 13 (1), 11
2017
Evaluation of metabolomics profiles of grain from maize hybrids derived from near-isogenic GM positive and negative segregant inbreds demonstrates that observed differences cannot be attributed unequivocally to the GM trait
GG Harrigan, TV Venkatesh, M Leibman, J Blankenship, T Perez, S Halls, ...
Metabolomics 12 (5), 1-14
2016
Changes in plasma metabolites and glucose homeostasis during omega-3 polyunsaturated fatty acid supplementation in women with polycystic ovary syndrome
SE Karakas, B Perroud, T Kind, M Palazoglu, O Fiehn
BBA Clinical
2016
Metabolomics by Gas Chromatography–Mass Spectrometry: Combined Targeted and Untargeted Profiling
O Fiehn
Current Protocols in Molecular Biology, 30.4. 1-30.4. 32
2016
Evidence that COG0325 proteins are involved in PLP homeostasis
L Prunetti, B El Yacoubi, CR Schiavon, E Kirkpatrick, L Huang, M Bailly, ...
Microbiology 162 (4), 694-706
2016
Serum phosphatidylethanolamine levels distinguish benign from malignant solitary pulmonary nodules and represent a potential diagnostic biomarker for lung cancer
JF Fahrmann, DD Grapov, BC DeFelice, S Taylor, K Kim, K Kelly, ...
Cancer Biomarkers, 1-9
2016
Citrus tristeza virus infection in sweet orange trees and a mandarin× tangor cross alters low molecular weight metabolites assessed using gas chromatography mass spectrometry (GC/MS)
A Pasamontes, WHK Cheung, J Simmons, AA Aksenov, DJ Peirano, ...
Metabolomics 12 (3), 1-10
2016
Registered report: The common feature of leukemia-associated IDH1 and IDH2 mutations is a neomorphic enzyme activity converting alpha-ketoglutarate to 2-hydroxyglutarate
O Fiehn, MR Showalter, CE Schaner-Tooley
eLife 5, e12626
2016
Metabolomic assessment of key maize resources: GC-MS and NMR profiling of grain from B73 hybrids of the nested association mapping (NAM) founders and of geographically diverse landraces
TV Venkatesh, AW Chassy, O Fiehn, S Flint-Garcia, Q Zeng, K Skogerson, ...
Journal of agricultural and food chemistry
2016
PHARMACOMETABOLOMIC SIGNATURES OF SUBJECTS WITH REFRACTORY MAJOR DEPRESSIVE DISORDER TREATED WITH ESKETAMINE OR KETAMINE
DM Rotroff, DG Corum, AA Motsinger-Reif, O Fiehn, N Bottrel, WC Drevets, ...
CLINICAL PHARMACOLOGY & THERAPEUTICS 99, S27-S28
2016
Increasing lipidomic coverage by selecting optimal mobile-phase modifiers in LC–MS of blood plasma
T Cajka, O Fiehn
Metabolomics 12 (2), 1-11
2016
Analysis of the genetic variation in growth, ecophysiology, and chemical and metabolomic composition of wood of Populus trichocarpa provenances
FP Guerra, JH Richards, O Fiehn, R Famula, BJ Stanton, R Shuren, ...
Tree Genetics & Genomes 12 (1), 1-16
2016
Eighteen new oleaginous yeast species
LA Garay, IR Sitepu, T Cajka, I Chandra, S Shi, T Lin, JB German, O Fiehn, ...
Journal of Industrial Microbiology & Biotechnology, 1-14
2016
Toward Merging Untargeted and Targeted Methods in Mass Spectrometry-Based Metabolomics and Lipidomics
T Cajka, O Fiehn
Analytical chemistry 88 (1), 524-545
2015
Ultrafast polyphenol metabolomics of red wines using microLC-MS/MS
Y Ma, N Tanaka, A Vaniya, T Kind, O Fiehn
Journal of agricultural and food chemistry
2015
The metabolome regulates the epigenetic landscape during naive-to-primed human embryonic stem cell transition
H Sperber, J Mathieu, Y Wang, A Ferreccio, J Hesson, Z Xu, KA Fischer, ...
Nature cell biology 17 (12), 1523-1535
2015
An in silico MS/MS library for automatic annotation of novel FAHFA lipids
Y Ma, T Kind, A Vaniya, I Gennity, JF Fahrmann, O Fiehn
Journal of cheminformatics 7 (1), 1-5
2015
Volatile organic compound (VOC) profiling of citrus tristeza virus infection in sweet orange citrus varietals using thermal desorption gas chromatography time of flight mass spectrometry (TD-GC/TOF-MS)
WHK Cheung, A Pasamontes, DJ Peirano, W Zhao, EE Grafton-Cardwell, ...
Metabolomics 11 (6), 1514-1525
2015
MINEs: open access databases of computationally predicted enzyme promiscuity products for untargeted metabolomics
JG Jeffryes, RL Colastani, M Elbadawi-Sidhu, T Kind, TD Niehaus, ...
Journal of cheminformatics 7 (1), 1-8
2015
Informatics for improved algal taxonomic classification and research: A case study of UTEX 2341
BT Higgins, D Nobles, Y Ma, W Wikoff, T Kind, O Fiehn, J Brand, ...
Algal Research 12, 545-549
2015
THE EXPOSOME: IDENTIFYING DRUGS AND FOOD COMPONENTS IN HUMAN COHORT SAMPLES USING UNTARGETED METABOLOMICS
O Fiehn, WR Wikoff, T Cajka
DRUG METABOLISM REVIEWS 47, 14-14
2015